Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8072

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8071: 16439 - Hypothetical Protein, at 357161 to 359241 16439 mRNA_8072: 16440 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 359607 to 361273 16440 mRNA_8073: 16441 - Hypothetical Protein, at 361679 to 362906 16441

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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358,676 - 16439 mRNA_8071 0.73 1.7
358,979 - 16439 mRNA_8071 0.87 1.3
358,991 + 16439 mRNA_8071 0.88 0.4
359,119 - -1.5
359,134 + 1.2
359,162 + 0.7
359,279 + -0.7
359,286 - 0.0
359,300 - 1.5
359,420 + 0.8
359,431 - -0.1
359,431 + 1.8
359,447 - 1.0
359,698 - 0.4
359,744 + 1.0
359,748 - 1.9
360,047 - 16440 mRNA_8072 0.26 -0.6
360,146 - 16440 mRNA_8072 0.32 -0.4
360,172 - 16440 mRNA_8072 0.34 0.9
360,889 - 16440 mRNA_8072 0.77 -0.9
361,166 + -1.2
361,170 - -4.2
361,183 - 0.8
361,192 + -0.4
361,195 - -1.1
361,309 + -0.3
361,310 - -0.1
361,329 + -0.9
361,329 + 0.3
361,337 - 1.1
361,342 + -0.3
361,459 + 0.5
361,466 - -0.1
361,477 - -0.2
361,481 + 0.1
361,482 - 1.2
361,486 - 0.9
361,489 - 0.2
361,493 - 1.1
361,494 + -0.1
361,496 - -0.2
361,501 + 0.3
361,503 - -0.7
361,606 + 0.6
361,613 - 0.2
361,615 - -0.5
361,616 - 0.1
361,616 - -0.3
361,627 - 0.0
361,633 - -1.1
361,639 - 0.1
361,641 + 0.4
361,641 + -1.3
361,643 + -0.4
361,652 - 0.8
361,655 + -0.2
361,749 - 1.7
361,760 - 1.3
361,764 - -0.6
361,767 - -0.1
361,779 - -0.1
361,788 + 2.3
361,796 - -1.3
361,801 - 0.1
361,802 + 16441 mRNA_8073 0.10 -0.2
361,803 + 16441 mRNA_8073 0.10 -0.3
361,804 + 16441 mRNA_8073 0.10 0.5
361,929 - 16441 mRNA_8073 0.20 0.9
361,934 + 16441 mRNA_8073 0.21 1.3
361,941 - 16441 mRNA_8073 0.21 0.4
361,941 - 16441 mRNA_8073 0.21 -1.5
361,954 + 16441 mRNA_8073 0.22 -0.6
362,107 - 16441 mRNA_8073 0.35 0.8
362,108 - 16441 mRNA_8073 0.35 -1.6