Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8035

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8034: 16402 - K00898 PDK2_3_4 pyruvate dehydrogenase kinase 2/3/4, at 272460 to 275670 16402 mRNA_8035: 16403 - KOG4350 Uncharacterized conserved protein, contains BTB/POZ domain, at 275930 to 278853 16403 mRNA_8036: 16404 - K01942 HLCS biotin--protein ligase, at 279404 to 281646 16404

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
275,072 - 16402 mRNA_8034 0.81 -5.2
275,104 - 16402 mRNA_8034 0.82 -2.4
275,223 + 16402 mRNA_8034 0.86 -2.7
275,384 - -3.4
275,417 - -4.7
275,435 + -1.8
275,541 - -0.0
275,563 - -4.2
275,564 - -2.0
275,565 - -3.2
275,571 - -2.8
275,610 - -0.7
275,613 + -3.4
275,633 + -1.6
275,705 - -1.0
275,709 - 1.3
275,713 - -0.8
275,716 + -1.1
275,718 - -0.6
275,723 - 0.4
275,723 - -1.8
275,726 + 2.3
275,735 + -0.4
275,742 - -1.3
275,763 - -0.4
275,763 + -0.8
276,030 + 1.1
276,083 - 0.0
276,166 - -0.6
276,201 - -1.5
276,456 + 16403 mRNA_8035 0.18 -0.2
276,510 - 16403 mRNA_8035 0.20 1.2
276,891 + 16403 mRNA_8035 0.33 0.9
277,186 + 16403 mRNA_8035 0.43 -0.5
277,456 - 16403 mRNA_8035 0.52 0.4
277,466 + 16403 mRNA_8035 0.53 -0.1
277,616 - 16403 mRNA_8035 0.58 -2.0
277,634 + 16403 mRNA_8035 0.58 -1.8
277,779 + 16403 mRNA_8035 0.63 0.3
277,846 - 16403 mRNA_8035 0.66 0.1
277,849 + 16403 mRNA_8035 0.66 0.5
278,213 + 16403 mRNA_8035 0.78 0.3
278,602 - -1.1
278,682 - -1.7
278,919 - -1.1
279,072 - -0.0
279,079 + -1.2
279,221 - 0.3
279,221 - -0.3
279,241 + -1.5
279,250 - 0.2
279,348 + 0.6
279,359 - 0.7
279,360 - 1.6
279,366 + 0.3
279,375 + 0.6
279,379 + -1.2