Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7990

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7989: 16357 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 157953 to 158694 16357 mRNA_7990: 16358 - Hypothetical Protein, at 159249 to 159873 16358

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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158,281 + 16357 mRNA_7989 0.44 1.2
158,327 + 16357 mRNA_7989 0.50 1.1
158,566 + 16357 mRNA_7989 0.83 -1.0
158,628 + 0.5
158,762 + 1.5
158,783 + 0.2
158,864 - 0.0
158,923 + -1.6
158,925 + 0.9
159,209 - -1.8
159,246 - 0.0
159,352 - 16358 mRNA_7990 0.16 1.1
159,364 + 16358 mRNA_7990 0.18 -0.7
159,484 + 16358 mRNA_7990 0.38 0.9
159,922 + 0.3
160,312 - -1.1
160,349 + 0.5
160,362 + 1.1
160,620 + 0.7
160,654 - 0.5
160,655 + 0.0
160,666 + -1.2
160,748 - -2.2
160,812 + -3.0
160,816 + -0.3
160,823 + -1.3
160,824 + -1.4
160,834 - -0.6
160,834 - -0.3
160,836 + -1.0
160,838 - -2.4
160,843 + 1.0
160,852 - -0.9
160,858 + -0.8
160,858 + -2.4