Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7965

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7964: 16332 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 108075 to 108950 16332 mRNA_7965: 16333 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 109378 to 110240 16333 mRNA_7966: 16334 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 110681 to 111565 16334

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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108,552 + 16332 mRNA_7964 0.54 1.5
108,585 - 16332 mRNA_7964 0.58 -2.6
108,623 + 16332 mRNA_7964 0.63 0.4
108,713 + 16332 mRNA_7964 0.73 0.0
108,748 - 16332 mRNA_7964 0.77 -1.3
108,863 + -1.5
108,868 - 2.5
108,917 - 1.4
108,933 + -0.1
108,988 + -0.7
108,988 + -1.1
109,049 + -1.8
109,158 + -0.8
109,451 + 0.5
109,515 - 16333 mRNA_7965 0.16 0.8
109,619 - 16333 mRNA_7965 0.28 1.9
109,670 + 16333 mRNA_7965 0.34 0.9
109,752 + 16333 mRNA_7965 0.43 -2.5
109,758 - 16333 mRNA_7965 0.44 -0.0
109,771 + 16333 mRNA_7965 0.46 0.1
109,913 + 16333 mRNA_7965 0.62 -0.6
109,920 + 16333 mRNA_7965 0.63 0.1
109,950 - 16333 mRNA_7965 0.66 -0.2
109,981 + 16333 mRNA_7965 0.70 0.7
110,008 + 16333 mRNA_7965 0.73 -0.5
110,069 - 16333 mRNA_7965 0.80 0.7
110,229 - 1.2
110,330 + 1.4
110,388 + 0.3
110,630 - -0.1
110,738 + -0.4
110,743 - 0.0
110,821 - 16334 mRNA_7966 0.16 0.3
110,923 + 16334 mRNA_7966 0.27 -0.8
110,928 + 16334 mRNA_7966 0.28 -0.4
111,129 + 16334 mRNA_7966 0.51 0.1
111,237 - 16334 mRNA_7966 0.63 0.5
111,239 - 16334 mRNA_7966 0.63 0.5