Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7955

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7954: 16322 - K01282 E3.4.14.- dipeptidyl aminopeptidase, at 88821 to 92965 16322 mRNA_7955: 16323 - K00128 ALDH aldehyde dehydrogenase (NAD+), at 93400 to 95869 16323 mRNA_7956: 16324 - K03146 THI4, THI1 thiamine thiazole synthase, at 96703 to 99029 16324

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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92,797 + -0.1
92,979 - 0.7
93,326 + 0.5
93,335 - -0.5
93,338 + -2.6
93,342 - -0.1
93,347 + 0.5
93,348 - -0.6
93,349 + 1.5
93,349 + 2.4
93,524 - -1.0
93,893 - 16323 mRNA_7955 0.20 1.3
93,956 - 16323 mRNA_7955 0.23 0.1
94,283 - 16323 mRNA_7955 0.36 -0.5
94,373 - 16323 mRNA_7955 0.39 0.3
94,382 - 16323 mRNA_7955 0.40 0.2
94,430 - 16323 mRNA_7955 0.42 1.1
94,691 - 16323 mRNA_7955 0.52 0.5
95,123 - 16323 mRNA_7955 0.70 0.0
95,165 - 16323 mRNA_7955 0.71 0.3
95,254 - 16323 mRNA_7955 0.75 0.7
95,257 + 16323 mRNA_7955 0.75 -1.6
95,534 - 16323 mRNA_7955 0.86 0.1
95,573 + 16323 mRNA_7955 0.88 2.0
95,841 - -1.2
95,858 - -1.9
96,009 - 0.4
96,072 - -0.6
96,083 + -0.7
96,179 + 0.8
96,285 - -0.9
96,298 + -1.7
96,473 + 0.6
96,497 + -1.6
96,513 + -1.1
96,533 - -1.3
96,538 + 1.9
96,554 - 1.0
96,567 - -0.0
96,574 + -0.2
96,580 - -0.7
96,590 - 0.2
96,605 + 0.6
96,616 + 0.2
96,631 + -0.5
96,633 - -0.5
96,641 - 0.2