Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7953

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7953: 16321 - K13667 RUMI, KTELC1 protein glucosyltransferase, at 85721 to 88276 16321 mRNA_7954: 16322 - K01282 E3.4.14.- dipeptidyl aminopeptidase, at 88821 to 92965 16322

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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84,860 - -0.7
85,155 - -0.0
85,172 + -0.7
85,284 + 0.6
85,297 + -0.5
85,466 + 0.8
85,614 - -1.4
85,619 - 0.9
85,627 + 1.3
85,652 + 0.3
85,656 + -0.5
85,714 + 0.1
85,777 - 1.4
85,902 + -1.3
85,943 - -0.8
86,322 + 16321 mRNA_7953 0.24 1.3
86,367 + 16321 mRNA_7953 0.25 0.4
86,461 - 16321 mRNA_7953 0.29 -0.1
86,466 - 16321 mRNA_7953 0.29 -2.5
86,810 + 16321 mRNA_7953 0.43 0.9
86,932 - 16321 mRNA_7953 0.47 1.9
87,119 - 16321 mRNA_7953 0.55 -0.3
87,149 + 16321 mRNA_7953 0.56 1.6
87,250 + 16321 mRNA_7953 0.60 0.0
87,265 - 16321 mRNA_7953 0.60 -2.8
87,451 + 16321 mRNA_7953 0.68 0.9
87,486 - 16321 mRNA_7953 0.69 0.4
87,524 - 16321 mRNA_7953 0.71 1.5
87,577 + 16321 mRNA_7953 0.73 -0.7
87,657 + 16321 mRNA_7953 0.76 0.3
87,693 - 16321 mRNA_7953 0.77 0.3
87,867 - 16321 mRNA_7953 0.84 0.7
87,958 - 16321 mRNA_7953 0.88 0.3
88,107 + -3.0
88,246 - 1.6
88,266 - 0.5
88,389 + -2.0
88,443 - 0.1
88,450 + 2.0
88,471 - -0.3
88,501 + 0.9
88,568 - -0.4
88,591 + 0.1
88,592 + 0.3
88,593 - -0.9
88,593 - -0.4
88,605 + -1.6
88,625 + 1.5
88,639 + -0.5
88,705 - 1.1
88,712 + -2.0
88,781 + 0.9
88,873 + -2.0
88,878 + 0.8
88,880 - -0.5
88,896 + -1.4
88,929 + -0.3
88,930 + 0.0
89,003 + -0.5
89,013 + 0.7
89,040 + 1.6
89,180 - -0.0
89,197 - 2.9