Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7936

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7935: 16303 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 51510 to 51923 16303 mRNA_7936: 16304 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 52307 to 53072 16304 mRNA_7937: 16305 - KOG0550 Molecular chaperone (DnaJ superfamily), at 53529 to 55424 16305

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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51,427 + 0.8
51,446 + 1.7
51,818 + 16303 mRNA_7935 0.74 -1.7
52,125 - -1.1
52,135 + 2.2
52,241 + -0.3
52,407 - 16304 mRNA_7936 0.13 0.1
52,456 + 16304 mRNA_7936 0.19 0.2
52,686 - 16304 mRNA_7936 0.49 1.1
52,797 - 16304 mRNA_7936 0.64 0.3
52,826 + 16304 mRNA_7936 0.68 -0.6
52,975 + 16304 mRNA_7936 0.87 -1.0
53,084 - 0.3
53,089 + -0.6
53,095 + -1.4
53,121 - 0.6
53,127 + -0.4
53,134 - -0.8
53,135 + 0.5
53,138 - 0.3
53,176 + 1.2
53,177 - 0.2
53,189 - -1.5
53,199 + 0.1
53,202 + 0.0
53,219 + -0.6
53,460 - 0.1
53,847 + 16305 mRNA_7937 0.17 -0.4
54,045 + 16305 mRNA_7937 0.27 0.0