Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7927

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7926: 16294 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 36892 to 37805 16294 mRNA_7927: 16295 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 38258 to 39116 16295 mRNA_7928: 16296 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 39408 to 40571 16296

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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37,269 + 16294 mRNA_7926 0.41 -1.3
37,693 + 16294 mRNA_7926 0.88 -0.9
37,709 + 16294 mRNA_7926 0.89 0.6
37,843 - -0.6
37,990 + -0.6
37,993 - -0.1
37,993 - 0.5
37,993 - -0.7
37,996 + 0.7
37,998 - 0.3
38,009 + 0.3
38,094 + 0.1
38,140 + 0.9
38,146 - -0.1
38,168 + -0.7
38,173 + 1.2
38,175 - 1.0
38,205 + -2.1
38,274 + -0.4
38,288 + -0.1
38,309 + -0.2
38,556 + 16295 mRNA_7927 0.35 -0.2
38,665 + 16295 mRNA_7927 0.47 1.0
38,726 - 16295 mRNA_7927 0.54 -0.1
38,735 - 16295 mRNA_7927 0.56 1.0
38,741 + 16295 mRNA_7927 0.56 0.2
38,743 + 16295 mRNA_7927 0.56 1.4
38,820 + 16295 mRNA_7927 0.65 -0.2
38,822 - 16295 mRNA_7927 0.66 -0.6
38,840 + 16295 mRNA_7927 0.68 0.4
38,842 + 16295 mRNA_7927 0.68 -1.6
38,991 + 16295 mRNA_7927 0.85 0.3
39,009 - 16295 mRNA_7927 0.87 1.7
39,022 + 16295 mRNA_7927 0.89 -0.9
39,057 + -1.9
39,131 + 0.5
39,165 + 1.6
39,177 - -0.1
39,264 - 1.9
39,302 - -0.4
39,317 + -0.2
39,338 + -1.0
39,479 - 0.8
39,639 - 16296 mRNA_7928 0.20 0.5
39,643 - 16296 mRNA_7928 0.20 0.3
39,665 + 16296 mRNA_7928 0.22 2.0
39,721 - 16296 mRNA_7928 0.27 -2.9
39,732 - 16296 mRNA_7928 0.28 -0.8
39,791 + 16296 mRNA_7928 0.33 -1.2
39,807 - 16296 mRNA_7928 0.34 0.5
39,890 + 16296 mRNA_7928 0.41 0.2
39,893 - 16296 mRNA_7928 0.42 -0.4
39,893 - 16296 mRNA_7928 0.42 0.4
39,893 - 16296 mRNA_7928 0.42 -0.0
39,957 + 16296 mRNA_7928 0.47 -1.7
39,992 - 16296 mRNA_7928 0.50 -0.2
40,077 + 16296 mRNA_7928 0.57 -0.7