Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7926

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7925: 16293 - Hypothetical Protein, at 35695 to 36297 16293 mRNA_7926: 16294 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 36892 to 37805 16294 mRNA_7927: 16295 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 38258 to 39116 16295

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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35,918 + 16293 mRNA_7925 0.37 -0.2
35,934 + 16293 mRNA_7925 0.40 0.5
35,947 - 16293 mRNA_7925 0.42 0.9
36,000 + 16293 mRNA_7925 0.51 2.5
36,040 + 16293 mRNA_7925 0.57 0.2
36,053 + 16293 mRNA_7925 0.59 0.4
36,200 - 16293 mRNA_7925 0.84 0.2
36,200 + 16293 mRNA_7925 0.84 -0.8
36,533 + 1.1
36,558 + 0.1
36,565 + -0.1
36,802 + -0.0
36,802 + 1.8
36,833 - -0.4
36,845 - -0.3
36,930 - 1.6
36,968 + -1.2
36,979 + 1.2
37,105 + 16294 mRNA_7926 0.23 0.7
37,155 + 16294 mRNA_7926 0.29 1.0
37,183 + 16294 mRNA_7926 0.32 1.2
37,238 - 16294 mRNA_7926 0.38 0.5
37,250 - 16294 mRNA_7926 0.39 0.4
37,269 + 16294 mRNA_7926 0.41 -1.3
37,693 + 16294 mRNA_7926 0.88 -0.9
37,709 + 16294 mRNA_7926 0.89 0.6
37,843 - -0.6
37,990 + -0.6
37,993 - -0.1
37,993 - 0.5
37,993 - -0.7
37,996 + 0.7
37,998 - 0.3
38,009 + 0.3
38,094 + 0.1
38,140 + 0.9
38,146 - -0.1
38,168 + -0.7
38,173 + 1.2
38,175 - 1.0
38,205 + -2.1
38,274 + -0.4
38,288 + -0.1
38,309 + -0.2
38,556 + 16295 mRNA_7927 0.35 -0.2
38,665 + 16295 mRNA_7927 0.47 1.0
38,726 - 16295 mRNA_7927 0.54 -0.1
38,735 - 16295 mRNA_7927 0.56 1.0
38,741 + 16295 mRNA_7927 0.56 0.2
38,743 + 16295 mRNA_7927 0.56 1.4