Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7839

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7838: 16206 - K01011 TST, MPST, sseA thiosulfate/3-mercaptopyruvate sulfurtransferase, at 1179136 to 1180563 16206 mRNA_7839: 16207 - Hypothetical Protein, at 1180939 to 1182264 16207 mRNA_7840: 16208 - K00620 argJ glutamate N-acetyltransferase / amino-acid N-acetyltransferase, at 1182791 to 1184398 16208

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,180,059 - 16206 mRNA_7838 0.65 0.7
1,180,089 - 16206 mRNA_7838 0.67 -0.4
1,180,112 - 16206 mRNA_7838 0.68 -0.4
1,180,283 - 16206 mRNA_7838 0.80 0.5
1,180,330 - 16206 mRNA_7838 0.84 -0.8
1,180,357 - 16206 mRNA_7838 0.86 0.3
1,180,365 - 16206 mRNA_7838 0.86 -1.1
1,180,397 - 16206 mRNA_7838 0.88 0.6
1,180,402 - 16206 mRNA_7838 0.89 -0.4
1,180,412 + 16206 mRNA_7838 0.89 -0.6
1,180,417 - 16206 mRNA_7838 0.90 -1.3
1,180,442 + 0.5
1,180,602 - 0.3
1,180,602 + -1.2
1,180,626 + -0.1
1,180,626 - -0.4
1,180,630 + 0.2
1,180,639 + -1.5
1,180,639 + 0.1
1,180,639 + -0.3
1,180,648 - -0.9
1,180,663 + -1.1
1,180,674 + 0.3
1,180,711 + 0.4
1,180,747 + 1.8
1,180,809 - -0.2
1,180,809 - 2.3
1,180,817 - 1.6
1,180,830 - 0.5
1,180,844 - 1.0
1,180,848 + 1.1
1,180,849 - 0.5
1,180,851 + 1.8
1,180,853 - -0.4
1,180,854 + 0.1
1,180,855 + -1.2
1,180,856 - -0.7
1,180,859 - -0.3
1,180,861 + 0.2
1,180,869 - -2.0
1,180,877 - -0.6
1,180,885 - 1.3
1,180,895 + 0.6
1,180,897 + 0.3
1,181,018 + 0.5
1,181,039 - 0.4
1,181,040 - -0.0
1,181,154 + 16207 mRNA_7839 0.16 0.6
1,181,182 - 16207 mRNA_7839 0.18 0.1
1,181,197 + 16207 mRNA_7839 0.19 0.6
1,181,311 - 16207 mRNA_7839 0.28 0.1
1,181,313 + 16207 mRNA_7839 0.28 1.2
1,181,319 + 16207 mRNA_7839 0.29 -1.6
1,181,325 - 16207 mRNA_7839 0.29 -1.0
1,181,343 + 16207 mRNA_7839 0.30 -0.5
1,181,346 - 16207 mRNA_7839 0.31 0.4
1,181,351 - 16207 mRNA_7839 0.31 -1.6
1,181,353 + 16207 mRNA_7839 0.31 0.0
1,181,353 + 16207 mRNA_7839 0.31 -0.2
1,181,354 + 16207 mRNA_7839 0.31 -0.9
1,181,358 + 16207 mRNA_7839 0.32 0.3
1,181,378 + 16207 mRNA_7839 0.33 0.5
1,181,512 + 16207 mRNA_7839 0.43 -1.1
1,181,655 + 16207 mRNA_7839 0.54 -0.0
1,182,278 - 0.3
1,182,286 + 0.1
1,182,400 + -0.3
1,182,646 + -0.2
1,182,676 - -0.1
1,182,823 - -1.6
1,183,103 + 16208 mRNA_7840 0.19 -0.6
1,183,126 - 16208 mRNA_7840 0.21 -3.2
1,183,234 - 16208 mRNA_7840 0.28 -0.4