Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7827

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7826: 16194 - KOG2533 Permease of the major facilitator superfamily, at 1154864 to 1157345 16194 mRNA_7827: 16195 - KOG4680 Uncharacterized conserved protein, contains ML domain, at 1158010 to 1158995 16195 mRNA_7828: 16196 - K01940 argG, ASS1 argininosuccinate synthase, at 1159228 to 1161010 16196

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,157,279 - -0.4
1,157,305 + 0.4
1,157,312 + -0.3
1,157,344 - -0.6
1,157,566 + -2.0
1,157,582 + 0.4
1,157,723 - 0.1
1,157,743 - -0.1
1,157,748 - 0.5
1,157,762 - 1.2
1,157,773 + 0.3
1,157,785 + -1.5
1,157,798 + 0.5
1,157,870 + 0.1
1,157,882 + -0.7
1,157,998 + -0.2
1,158,014 + -0.9
1,158,183 + 16195 mRNA_7827 0.18 -0.5
1,158,221 + 16195 mRNA_7827 0.21 -1.1
1,158,433 - 16195 mRNA_7827 0.43 1.3
1,158,460 + 16195 mRNA_7827 0.46 0.1
1,158,600 + 16195 mRNA_7827 0.60 0.4
1,158,605 + 16195 mRNA_7827 0.60 -1.0
1,158,861 - 16195 mRNA_7827 0.86 -1.0
1,158,884 + 16195 mRNA_7827 0.89 0.3
1,158,891 + 16195 mRNA_7827 0.89 0.5
1,159,024 - -1.6
1,159,051 + 0.1
1,159,057 + 1.0
1,159,218 + -0.0
1,159,271 - 0.5
1,159,459 - 16196 mRNA_7828 0.13 -2.3
1,159,516 - 16196 mRNA_7828 0.16 -3.6