Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7800

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7799: 16167 - KOG1738 Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like, at 1091571 to 1096193 16167 mRNA_7800: 16168 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1096651 to 1099129 16168 mRNA_7801: 16169 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1099956 to 1102203 16169

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,096,267 - 0.4
1,096,329 - -0.3
1,096,349 + -0.0
1,096,356 + 0.4
1,096,465 + -1.6
1,096,519 + 0.3
1,096,825 + -0.4
1,096,918 - 16168 mRNA_7800 0.11 0.7
1,096,919 - 16168 mRNA_7800 0.11 -0.4
1,096,922 + 16168 mRNA_7800 0.11 0.3
1,096,949 - 16168 mRNA_7800 0.12 3.0
1,096,973 + 16168 mRNA_7800 0.13 -1.2
1,097,402 - 16168 mRNA_7800 0.30 0.4
1,097,692 + 16168 mRNA_7800 0.42 -1.1
1,097,809 + 16168 mRNA_7800 0.47 -0.7
1,097,821 - 16168 mRNA_7800 0.47 -0.6
1,098,038 + 16168 mRNA_7800 0.56 1.5
1,098,089 - 16168 mRNA_7800 0.58 0.9
1,098,110 + 16168 mRNA_7800 0.59 -0.5
1,098,116 - 16168 mRNA_7800 0.59 0.6
1,098,122 + 16168 mRNA_7800 0.59 -1.6
1,098,180 + 16168 mRNA_7800 0.62 2.3
1,098,264 + 16168 mRNA_7800 0.65 0.1
1,098,450 - 16168 mRNA_7800 0.73 1.1
1,098,452 + 16168 mRNA_7800 0.73 0.6
1,098,556 - 16168 mRNA_7800 0.77 -1.0
1,098,723 - 16168 mRNA_7800 0.84 -0.1
1,098,854 - 16168 mRNA_7800 0.89 0.1
1,099,265 - -0.1
1,099,339 - 0.1
1,099,395 - 0.1
1,099,511 - -0.3
1,099,552 - 0.5
1,099,568 - 0.4
1,099,574 - -0.2
1,099,595 + 0.0
1,099,717 + -1.3
1,099,717 - -0.1
1,099,852 + 0.1