Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7773

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7772: 16140 - Hypothetical Protein, at 1030603 to 1031384 16140 mRNA_7773: 16141 - K12857 SNRNP40, PRP8BP Prp8 binding protein, at 1031798 to 1033403 16141 mRNA_7774: 16142 - KOG1546 Metacaspase involved in regulation of apoptosis, at 1033598 to 1035909 16142

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,030,913 - 16140 mRNA_7772 0.40 0.9
1,031,531 - 1.5
1,031,538 + 0.3
1,031,554 + -1.3
1,031,822 + -1.0
1,031,822 - -1.2
1,031,826 + -1.2
1,031,830 - 1.5
1,031,846 + 0.0
1,031,969 - 16141 mRNA_7773 0.11 -0.9
1,031,979 + 16141 mRNA_7773 0.11 0.5
1,032,258 + 16141 mRNA_7773 0.29 -2.1
1,032,272 + 16141 mRNA_7773 0.30 -1.8
1,032,410 - 16141 mRNA_7773 0.38 -1.2
1,032,528 - 16141 mRNA_7773 0.45 -1.3
1,032,853 + 16141 mRNA_7773 0.66 1.0
1,033,127 + 16141 mRNA_7773 0.83 -3.3
1,033,257 + -1.9
1,033,394 - 0.9
1,033,543 + -1.9
1,033,560 + 0.0
1,033,702 - 1.9
1,033,711 + 1.2
1,033,714 - -0.6
1,033,984 - 16142 mRNA_7774 0.17 2.4
1,033,997 + 16142 mRNA_7774 0.17 0.8