Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7724

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7723: 16091 - HMMPfam-Domain of unknown function (DUF427)-PF04248, at 931116 to 931814 16091 mRNA_7724: 16092 - KOG2644 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes, at 932061 to 933452 16092 mRNA_7725: 16093 - Hypothetical Protein, at 933861 to 936370 16093

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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931,144 - 1.2
931,282 + 16091 mRNA_7723 0.24 -1.1
931,309 - 16091 mRNA_7723 0.28 2.0
931,314 + 16091 mRNA_7723 0.28 -0.2
931,640 - 16091 mRNA_7723 0.75 0.1
931,754 + 0.6
931,763 + 0.4
931,773 + -0.1
931,810 + -1.2
931,905 - -0.9
931,944 - 1.1
932,104 + -0.9
932,107 - 0.0
932,228 + 16092 mRNA_7724 0.12 -0.3
932,263 + 16092 mRNA_7724 0.15 -0.4
932,339 + 16092 mRNA_7724 0.20 1.4
932,377 - 16092 mRNA_7724 0.23 0.1
932,500 + 16092 mRNA_7724 0.32 -1.3
932,542 - 16092 mRNA_7724 0.35 2.2
932,542 + 16092 mRNA_7724 0.35 0.4
932,776 - 16092 mRNA_7724 0.51 -0.4
933,038 - 16092 mRNA_7724 0.70 0.5
933,068 - 16092 mRNA_7724 0.72 0.1
933,307 - 16092 mRNA_7724 0.90 -0.5
933,356 - 0.4
933,363 + 0.9
933,369 + 0.4
933,375 + 0.5
933,489 - 0.3
933,505 - 0.6
933,512 + 0.3
933,512 - 0.6
933,521 + 2.2
933,523 + -0.0
933,531 - -0.0
933,536 + 0.1
933,649 + 1.1
933,673 - 1.0
933,686 + -2.3
933,704 + 0.4
933,863 + -1.9
934,103 + -1.0