Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7680

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7680: 16048 - K11992 ACOT8, PTE acyl-CoA thioesterase 8, at 824116 to 826082 16048 mRNA_7681: 16049 - Hypothetical Protein, at 826300 to 827705 16049

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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823,118 - -1.8
823,120 + 0.4
823,130 - -0.2
823,132 - 0.6
823,144 + -0.2
823,150 + 0.1
823,157 + 0.9
823,329 + -0.4
823,476 - 0.3
823,555 - 0.1
823,575 + 1.3
823,712 + 1.8
823,831 - -0.2
823,871 + 0.8
823,957 - 0.6
823,974 - -0.3
823,995 - 0.4
823,996 - -0.3
823,999 - 0.7
824,000 - -0.2
824,004 + -0.9
824,032 + 1.1
824,034 + 0.7
824,034 - -0.9
824,035 + 0.7
824,046 + -0.2
824,050 + 0.6
824,055 + -0.3
824,148 + 1.4
824,156 + 1.4
824,157 - 0.9
824,171 - 0.4
824,178 - -0.4
824,184 + 0.1
824,184 - -1.0
824,196 + -0.4
824,321 - 16048 mRNA_7680 0.10 1.9
824,341 + 16048 mRNA_7680 0.11 0.4
824,346 - 16048 mRNA_7680 0.12 0.1
824,486 + 16048 mRNA_7680 0.19 -1.7
824,493 + 16048 mRNA_7680 0.19 -1.3
824,867 + 16048 mRNA_7680 0.38 0.1
824,996 + 16048 mRNA_7680 0.45 0.1
825,203 + 16048 mRNA_7680 0.55 -0.5
825,287 - 16048 mRNA_7680 0.60 0.1
825,331 + 16048 mRNA_7680 0.62 -0.6
825,332 + 16048 mRNA_7680 0.62 -0.1
825,560 - 16048 mRNA_7680 0.73 1.0
825,647 + 16048 mRNA_7680 0.78 2.3
825,900 - -0.7
826,098 - 1.9
826,240 + 0.3
826,344 + 0.5
826,347 - -0.1
826,444 + 16049 mRNA_7681 0.10 -0.1
826,509 - 16049 mRNA_7681 0.15 1.0
827,060 + 16049 mRNA_7681 0.54 -0.8