Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7677

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7676: 16044 - Hypothetical Protein, at 818455 to 819544 16044 mRNA_7677: 16045 - Hypothetical Protein, at 820040 to 821034 16045 mRNA_7678: 16046 - K00657 speG diamine N-acetyltransferase, at 821386 to 822078 16046

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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819,168 - 16044 mRNA_7676 0.65 0.4
819,511 + 0.2
819,631 + -0.8
819,631 - 0.6
819,749 + -0.0
819,767 - 1.9
819,890 + 0.8
819,901 + 0.7
819,902 - -0.4
819,905 + -0.8
820,039 - 0.5
820,343 + 16045 mRNA_7677 0.30 -0.2
820,471 - 16045 mRNA_7677 0.43 0.7
820,498 + 16045 mRNA_7677 0.46 -1.1
820,616 + 16045 mRNA_7677 0.58 0.2
820,667 + 16045 mRNA_7677 0.63 1.0
820,668 - 16045 mRNA_7677 0.63 -0.6
820,776 - 16045 mRNA_7677 0.74 1.6
820,787 + 16045 mRNA_7677 0.75 0.1
821,065 - 1.4
821,071 - -1.8
821,133 - 1.6
821,219 - -0.6
821,351 + -0.6
821,724 + 16046 mRNA_7678 0.49 -0.5
821,824 + 16046 mRNA_7678 0.63 -0.3
821,827 + 16046 mRNA_7678 0.64 -0.0
821,974 + 16046 mRNA_7678 0.85 2.2