Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7675

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7674: 16042 - SUPERFAMILY--SSF48371, at 813825 to 816287 16042 mRNA_7675: 16043 - Hypothetical Protein, at 816849 to 817556 16043 mRNA_7676: 16044 - Hypothetical Protein, at 818455 to 819544 16044

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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816,413 + 1.2
816,562 - 0.4
816,678 - -0.6
816,692 + -0.1
816,694 - 0.6
816,695 - -1.2
816,715 + -0.2
817,072 - 16043 mRNA_7675 0.31 -0.4
817,121 - 16043 mRNA_7675 0.38 0.8
817,146 - 16043 mRNA_7675 0.42 0.5
817,294 - 16043 mRNA_7675 0.63 0.8
817,298 - 16043 mRNA_7675 0.63 0.2
817,321 + 16043 mRNA_7675 0.67 0.3
817,378 - 16043 mRNA_7675 0.75 0.3
817,412 + 16043 mRNA_7675 0.80 -0.0
817,537 - 3.8
817,587 + 0.4
817,592 + -2.3
817,692 - 0.5
817,692 + 1.8
817,694 - 1.5
817,700 - -1.9
817,707 - 0.5
817,709 - 0.8
817,719 - 0.3
818,034 + -0.3
818,037 - 0.9
818,038 - -0.1
818,053 - 0.6
818,158 + 0.2
818,159 + 0.1
818,304 + 1.8
818,394 + 0.8
818,436 + 0.8
818,444 + -0.3
818,450 - 1.1
818,462 - 1.0