Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7620

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7619: 15987 - Interpro NADH-ubiquinone oxidoreductase MWFE subunit 0, at 696568 to 697325 15987 mRNA_7620: 15988 - Hypothetical Protein, at 698215 to 700242 15988 mRNA_7621: 15989 - KOG4449 Translocase of outer mitochondrial membrane complex, subunit TOM7, at 700373 to 700880 15989 mRNA_7622: 15990 - K17496 TIM50 mitochondrial import inner membrane translocase subunit TIM50, at 701020 to 702915 15990

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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697,785 - -3.3
697,790 - -1.3
697,795 - -3.8
697,805 - 0.8
697,809 - 0.1
697,936 - -0.5
697,950 + 1.1
697,964 + 0.1
697,964 - 0.7
698,115 + 0.4
698,147 - 0.2
698,239 - -0.2
698,241 + 2.0
698,404 + 1.1
698,547 + 15988 mRNA_7620 0.16 1.8
698,667 - 15988 mRNA_7620 0.22 -2.8
699,738 + 15988 mRNA_7620 0.75 0.4
699,849 - 15988 mRNA_7620 0.81 0.6
699,986 - 15988 mRNA_7620 0.87 0.8
700,688 + 15989 mRNA_7621 0.62 -0.3
700,865 - -0.8
700,866 - 0.0
700,880 - 2.5
700,902 + 1.2