Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7596

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7594: 15962 - K00106 XDH xanthine dehydrogenase/oxidase, at 640991 to 646168 15962 mRNA_7595: 15963 - K02151 ATPeV1F, ATP6S14 V-type H+-transporting ATPase subunit F, at 646421 to 647106 15963 mRNA_7596: 15964 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 647163 to 648088 15964 mRNA_7597: 15965 - Hypothetical Protein, at 648262 to 649679 15965

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
646,267 - 0.1
646,267 - 0.6
646,273 + 1.8
646,390 + -0.3
647,267 - 15964 mRNA_7596 0.11 1.0
647,280 + 15964 mRNA_7596 0.13 0.2
647,281 + 15964 mRNA_7596 0.13 -2.1
647,281 - 15964 mRNA_7596 0.13 -1.4
647,287 + 15964 mRNA_7596 0.13 -1.9
647,441 - 15964 mRNA_7596 0.30 2.0
647,733 + 15964 mRNA_7596 0.62 -1.1
647,767 + 15964 mRNA_7596 0.65 0.0
648,019 + 0.5
648,022 - -0.8
648,036 + -0.9
648,036 + 1.9
648,297 + -1.3
648,324 - 0.1
648,460 + 15965 mRNA_7597 0.14 -2.0
648,588 - 15965 mRNA_7597 0.23 -0.5
648,883 - 15965 mRNA_7597 0.44 0.5