Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7590

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7589: 15957 - K19785 POF1 nicotinamide-nucleotide adenylyltransferase, at 629580 to 630504 15957 mRNA_7590: 15958 - Hypothetical Protein, at 630587 to 632557 15958 mRNA_7591: 15959 - Hypothetical Protein, at 632641 to 636261 15959

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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629,636 - 0.7
629,776 - 15957 mRNA_7589 0.21 -0.0
629,776 + 15957 mRNA_7589 0.21 1.4
629,783 - 15957 mRNA_7589 0.22 0.4
629,791 + 15957 mRNA_7589 0.23 0.3
629,798 + 15957 mRNA_7589 0.24 0.2
629,800 + 15957 mRNA_7589 0.24 1.9
629,919 - 15957 mRNA_7589 0.37 0.0
630,363 - 15957 mRNA_7589 0.85 -0.6
630,389 + 15957 mRNA_7589 0.87 -2.0
630,437 - -0.0
630,842 + 15958 mRNA_7590 0.13 0.3
630,849 - 15958 mRNA_7590 0.13 0.8
630,909 + 15958 mRNA_7590 0.16 0.1
631,441 + 15958 mRNA_7590 0.43 1.7
631,832 - 15958 mRNA_7590 0.63 -1.0
632,138 - 15958 mRNA_7590 0.79 -0.3
632,159 + 15958 mRNA_7590 0.80 0.2
632,286 - 15958 mRNA_7590 0.86 -0.5
632,297 - 15958 mRNA_7590 0.87 -0.2
632,313 + 15958 mRNA_7590 0.88 2.1
632,315 + 15958 mRNA_7590 0.88 0.6
632,319 + 15958 mRNA_7590 0.88 -2.1
632,370 - -0.4
632,453 + -0.9
632,602 + -0.3
632,621 - -2.4
632,690 - -1.9
632,713 + 1.1
632,758 - -0.0
632,775 + 1.6
632,873 + -0.5
632,876 - -0.4
632,919 + 1.2
632,922 + 2.6
632,963 + 0.3
633,035 - 15959 mRNA_7591 0.11 0.4
633,047 + 15959 mRNA_7591 0.11 -0.4
633,054 - 15959 mRNA_7591 0.11 0.1
633,192 - 15959 mRNA_7591 0.15 0.5
633,201 - 15959 mRNA_7591 0.15 1.4
633,316 + 15959 mRNA_7591 0.19 -0.9
633,321 - 15959 mRNA_7591 0.19 -0.4
633,368 - 15959 mRNA_7591 0.20 1.0
633,385 + 15959 mRNA_7591 0.21 0.1