Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7583

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7582: 15950 - KOG2534 DNA polymerase IV (family X), at 614883 to 616136 15950 mRNA_7583: 15951 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 616198 to 617544 15951 mRNA_7584: 15952 - KOG0546 HSP90 co-chaperone CPR7/Cyclophilin, at 617839 to 618826 15952

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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615,295 + 15950 mRNA_7582 0.33 1.6
615,725 + 15950 mRNA_7582 0.67 -1.3
615,748 + 15950 mRNA_7582 0.69 0.0
615,758 - 15950 mRNA_7582 0.70 -0.3
615,765 + 15950 mRNA_7582 0.70 -0.3
615,768 - 15950 mRNA_7582 0.71 -1.0
615,775 + 15950 mRNA_7582 0.71 3.3
616,046 - 0.4
616,199 + 0.2
617,080 + 15951 mRNA_7583 0.65 0.3
617,214 + 15951 mRNA_7583 0.75 4.4
617,251 - 15951 mRNA_7583 0.78 0.0
617,349 + 15951 mRNA_7583 0.85 0.1
617,364 - 15951 mRNA_7583 0.87 0.6
617,484 + -2.6
617,622 + 1.2
617,633 - 0.0
617,686 + -1.1
617,794 + -0.3
617,833 + 0.7
618,089 - 15952 mRNA_7584 0.25 2.5
618,239 - 15952 mRNA_7584 0.40 -0.5