Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7539

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7539: 15907 - K07300 chaA, CAX Ca2+-H+ antiporter, at 519946 to 522544 15907 mRNA_7540: 15908 - K01012 bioB biotin synthase, at 522757 to 524526 15908

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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518,947 + -2.1
518,959 - -0.5
518,977 + 1.2
519,067 + 0.2
519,115 + 2.7
519,121 - -1.2
519,125 + -0.2
519,142 + -0.2
519,146 - -0.2
519,157 + -1.2
519,162 + 0.1
519,189 - -0.2
519,199 - 0.1
519,226 - -0.2
519,244 - 2.2
519,265 + 0.6
519,373 - -0.5
519,386 - -0.3
519,515 - 0.2
519,530 - -0.9
519,542 + -0.8
519,550 - -4.9
519,552 - 0.2
519,554 + -2.3
519,692 - -0.2
520,117 - -0.0
520,573 + 15907 mRNA_7539 0.24 1.5
521,159 - 15907 mRNA_7539 0.47 -0.2
521,404 - 15907 mRNA_7539 0.56 -1.9
521,446 + 15907 mRNA_7539 0.58 -0.0
521,453 + 15907 mRNA_7539 0.58 -1.4
521,827 - 15907 mRNA_7539 0.72 0.9
522,156 + 15907 mRNA_7539 0.85 -1.6
522,287 + -0.2
522,303 - 0.2
522,387 - -0.9
522,402 - -0.1
522,451 - 0.2
522,484 + 0.4
522,623 - -0.3
522,625 + -1.4
522,627 + 1.2
522,628 + 0.5
522,630 - -1.8
522,633 + 0.8
522,646 + -0.4
522,653 - 0.1
522,659 + -0.6
522,671 + 0.2
522,682 - -1.0
522,786 - -0.6
522,811 - -0.5