Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7486

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7485: 15853 - K08158 MDR1, FLR1, CAF5 MFS transporter, DHA1 family, multidrug resistance protein, at 394901 to 397101 15853 mRNA_7486: 15854 - K08287 E2.7.12.1 dual-specificity kinase, at 397692 to 399920 15854 mRNA_7487: 15855 - K17619 MDP1 magnesium-dependent phosphatase 1, at 400659 to 401356 15855

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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396,834 - 15853 mRNA_7485 0.88 0.9
396,963 + 0.2
397,419 + -0.1
397,569 - -0.9
397,592 + 0.1
397,728 + -0.5
397,810 + -0.6
397,887 - -1.3
398,271 - 15854 mRNA_7486 0.26 -0.8
398,738 + 15854 mRNA_7486 0.47 0.6
398,899 - 15854 mRNA_7486 0.54 -1.5
399,609 - 15854 mRNA_7486 0.86 -1.5
399,631 + 15854 mRNA_7486 0.87 0.5
399,743 + -2.5
399,895 + 0.4
399,911 - -2.3
399,912 + -1.3
400,050 - -0.3
400,064 + 1.0
400,070 - 0.3
400,190 - -0.7
400,209 - 1.1
400,211 - 0.3
400,218 + 0.4
400,219 + 0.3
400,225 - 0.7
400,229 - -0.3
400,230 + 0.8
400,230 + 0.2
400,238 + 1.0
400,508 - 2.1
400,667 + 0.9