Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7482

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7481: 15849 - HMMPfam-Mitochondrial domain of unknown function (DUF1713)-PF08213, at 387744 to 389157 15849 mRNA_7482: 15850 - Hypothetical Protein, at 389619 to 390464 15850 mRNA_7483: 15851 - HMMPfam-Stress-induced bacterial acidophilic repeat motif-PF10685, at 390793 to 391582 15851

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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389,232 - -1.0
389,246 - -0.7
389,254 - 0.4
389,429 + -0.6
389,993 + 15850 mRNA_7482 0.44 0.7
390,137 + 15850 mRNA_7482 0.61 -0.3
390,289 + 15850 mRNA_7482 0.79 0.0
390,290 - 15850 mRNA_7482 0.79 1.2
390,407 + -0.1
390,438 - 0.1
390,575 - 2.5
390,586 + -0.6
390,588 + 0.3
391,027 - 15851 mRNA_7483 0.30 0.7