Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7475

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7475: 15843 - K08158 MDR1, FLR1, CAF5 MFS transporter, DHA1 family, multidrug resistance protein, at 374364 to 376730 15843

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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373,385 - -2.0
373,388 - 0.4
373,403 - 0.8
373,404 - 0.9
373,454 - 1.5
373,577 - -0.3
373,733 - -1.2
373,753 - 0.8
373,762 - -0.2
373,791 + 1.1
373,813 - 0.1
373,833 - -0.2
373,848 - -0.4
373,957 + -0.8
373,999 + 0.1
374,009 - 0.8
374,016 - 0.9
374,027 + -1.1
374,073 + -3.1
374,077 + 2.5
374,112 + -0.2
374,122 + -0.1
374,131 - -0.8
374,137 - -0.0
374,147 - 0.6
374,154 + 0.8
374,164 - 0.1
374,174 - 2.7
374,182 + -0.2
374,185 + 0.6
374,202 + 0.7
374,213 + -2.1
374,213 + -0.4
374,215 - 0.5
374,217 + -0.0
374,218 + -0.5
374,223 + -0.6
374,224 - -0.7
374,225 - -0.4
374,226 - 1.0
374,240 + 0.4
374,352 - 0.5
374,376 - 0.2
374,386 + 0.6
374,508 + -0.4
374,524 + 0.3
375,407 - 15843 mRNA_7475 0.44 0.6
375,696 + 15843 mRNA_7475 0.56 -1.6
376,586 - 0.7
376,724 - 0.4
377,454 - 0.4
377,484 - -1.3
377,494 - -1.2
377,508 + -1.0
377,512 - 1.2
377,589 - -0.6
377,593 + -1.1
377,706 - 1.6
377,712 - -0.8
377,715 - -0.5
377,716 + -0.5
377,725 + -0.5
377,728 + -0.8