Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7474

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7473: 15841 - Hypothetical Protein, at 367495 to 368778 15841 mRNA_7474: 15842 - HMMPfam-Glycosyl transferases group 1-PF00534,HMMPfam-Starch synthase catalytic domain-PF08323,SUPERFAMILY--SSF53756, at 369055 to 372143 15842

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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368,180 + 15841 mRNA_7473 0.53 0.1
368,360 + 15841 mRNA_7473 0.67 0.2
368,481 + 15841 mRNA_7473 0.77 -0.5
368,497 + 15841 mRNA_7473 0.78 -0.3
368,498 + 15841 mRNA_7473 0.78 0.7
368,513 - 15841 mRNA_7473 0.79 0.5
368,626 + 15841 mRNA_7473 0.88 0.9
368,626 + 15841 mRNA_7473 0.88 -0.6
368,644 + 15841 mRNA_7473 0.89 0.3
368,749 - -2.2
368,758 + -1.7
368,765 + -2.5
368,769 - -1.7
368,774 + -0.5
368,776 + 0.2
368,778 - -1.7
368,780 - -0.3
368,786 - -0.2
368,800 - -0.2
368,801 + 0.8
368,805 + 0.3
368,806 + 0.7
368,825 + 3.3
368,912 - 0.7
368,938 + 0.7
368,942 - -0.4
368,944 - 0.7
368,944 - 1.6
368,947 + 0.2
368,947 - 0.3
368,947 + -0.3
368,953 + -0.1
368,956 - 0.5
368,956 - -0.8
368,958 - 1.4
368,963 + -0.5
368,965 - -0.3
368,965 - 0.8
368,967 - 0.8
368,971 - -0.0
368,975 - 0.1
368,977 + 0.2
368,980 - 0.5
368,981 - 0.1
368,982 - 0.7
368,983 + 0.8
368,985 - -0.2
368,986 - 1.2
368,986 - 0.6
368,997 + 0.4
369,002 - -2.2
369,006 - -1.3
369,011 - 1.7
369,035 + 0.2
369,068 - 0.3
369,071 - 0.4
369,074 + -0.7
369,077 - -0.9
369,078 - 0.5
369,079 - 0.2
369,081 - -4.7
369,085 + 0.6
369,094 + -1.2
369,100 + 1.7
369,102 - 0.0
369,102 - 0.6
369,104 + -0.9
369,107 + 2.3
369,108 - -0.5
369,111 + 0.9
369,111 + 1.4
369,111 + 1.1
369,116 - -0.0
369,117 - 1.5
369,127 - -0.6
369,129 - 0.0
369,132 - -0.8
369,139 + 0.8
369,139 + 0.2
369,152 - 0.8
369,217 + 1.3
369,237 + -0.4
369,241 - 1.4
369,262 - 0.2
369,263 + 0.0
369,263 + 0.3
369,269 + 0.1
369,344 + 0.1
369,402 + 15842 mRNA_7474 0.11 -0.1
369,412 + 15842 mRNA_7474 0.12 0.4
369,433 - 15842 mRNA_7474 0.12 -0.5
369,448 - 15842 mRNA_7474 0.13 -0.9
369,472 - 15842 mRNA_7474 0.13 3.6
369,507 + 15842 mRNA_7474 0.15 1.0
369,564 - 15842 mRNA_7474 0.16 0.8
369,577 + 15842 mRNA_7474 0.17 1.8
369,586 + 15842 mRNA_7474 0.17 1.4
369,601 - 15842 mRNA_7474 0.18 1.7
369,728 + 15842 mRNA_7474 0.22 0.7
369,731 + 15842 mRNA_7474 0.22 1.6
369,853 + 15842 mRNA_7474 0.26 0.5
369,853 - 15842 mRNA_7474 0.26 1.6
370,557 - 15842 mRNA_7474 0.49 1.6
371,020 - 15842 mRNA_7474 0.64 1.9
371,027 + 15842 mRNA_7474 0.64 1.8
371,186 - 15842 mRNA_7474 0.69 2.4
371,320 + 15842 mRNA_7474 0.73 2.1
371,333 + 15842 mRNA_7474 0.74 1.3
371,339 + 15842 mRNA_7474 0.74 0.7
371,473 + 15842 mRNA_7474 0.78 1.4
371,480 + 15842 mRNA_7474 0.79 0.6
371,613 - 15842 mRNA_7474 0.83 1.6
371,633 + 15842 mRNA_7474 0.83 1.3
371,639 + 15842 mRNA_7474 0.84 0.5
371,760 + 15842 mRNA_7474 0.88 -1.5
372,089 + 2.0
372,210 - 0.0
372,218 + 0.4
372,227 + 0.1
372,240 + 0.3
372,246 + 0.4
372,250 + 0.7
372,256 + 0.2
372,262 - -0.2
372,266 + -0.1
372,276 + 1.5
372,397 + -0.5
372,409 + 0.8
372,415 + 2.0
372,550 - -0.5
372,586 + -0.3
372,701 - 0.3
372,702 + -0.5
372,705 - -0.4
372,708 + 0.6
372,842 - 1.6
372,849 + -3.0
373,005 - 1.0
373,110 - 1.2
373,112 - -0.4