Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7471

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7470: 15838 - K12815 DHX38, PRP16 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16, at 356316 to 361042 15838 mRNA_7471: 15839 - K00838 ARO8 aromatic amino acid aminotransferase I, at 361515 to 364061 15839

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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361,063 + 0.4
361,236 + -1.4
361,326 - 0.2
361,347 - 0.9
361,516 - -0.7
361,528 - -3.3
361,810 + 15839 mRNA_7471 0.12 -0.5
361,948 + 15839 mRNA_7471 0.17 -0.2
362,338 + 15839 mRNA_7471 0.32 -0.9
362,928 + 15839 mRNA_7471 0.55 0.1
363,079 - 15839 mRNA_7471 0.61 -0.6
363,082 + 15839 mRNA_7471 0.62 -0.3
363,083 + 15839 mRNA_7471 0.62 -0.8
363,098 + 15839 mRNA_7471 0.62 0.1
363,221 - 15839 mRNA_7471 0.67 3.0
363,345 + 15839 mRNA_7471 0.72 -0.3
363,642 - 15839 mRNA_7471 0.84 0.6
363,663 - 15839 mRNA_7471 0.84 -0.6
363,920 - 1.0
363,936 - -0.6
363,950 - 0.1
363,962 - 0.3
363,963 + -0.2
364,564 + 0.3
364,641 - -0.5
364,641 - 0.2
364,695 - -0.7
364,725 - -1.1
364,829 - 0.2