Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7464

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7463: 15831 - Hypothetical Protein, at 337178 to 338673 15831 mRNA_7464: 15832 - BLAST expressed protein [Schizophyllum commune H4-8], at 339268 to 340751 15832 mRNA_7465: 15833 - K08518 STXBP5, SRO7_77 syntaxin-binding protein 5, at 340933 to 344642 15833

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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338,305 + 15831 mRNA_7463 0.75 -0.4
338,470 + 15831 mRNA_7463 0.86 0.9
338,738 + 0.7
338,859 + 1.5
338,873 + 1.0
338,925 + -1.5
339,035 - 0.1
339,038 - -1.0
339,174 + 0.5
339,180 - -0.7
339,200 - 0.4
339,331 - 1.5
339,338 + -0.5
339,367 - 1.2
339,482 - 15832 mRNA_7464 0.14 -2.9
339,527 + 15832 mRNA_7464 0.17 0.1
339,529 + 15832 mRNA_7464 0.18 -1.1
339,673 - 15832 mRNA_7464 0.27 0.5
339,792 + 15832 mRNA_7464 0.35 1.1
339,801 + 15832 mRNA_7464 0.36 -1.0
340,802 - 0.3
340,816 - -0.7
340,832 - 1.4
340,838 - -0.3
340,839 + 0.4
340,848 + 0.4
340,850 + -0.5
340,850 + 0.4
340,859 + 0.7
340,980 - -0.7
340,988 + -0.0
340,994 + -0.1
341,006 + -2.4
341,266 - -1.0
341,285 - -1.2
341,299 + -0.7
341,433 - 15833 mRNA_7465 0.13 -1.2
341,473 - 15833 mRNA_7465 0.15 0.8
341,581 + 15833 mRNA_7465 0.17 0.8
341,749 + 15833 mRNA_7465 0.22 0.1