Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7447

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7446: 15814 - K14085 ALDH7A1 aldehyde dehydrogenase family 7 member A1, at 295299 to 297030 15814 mRNA_7447: 15815 - HMMPfam-Uncharacterized protein conserved in bacteria (DUF2236)-PF09995, at 297396 to 299306 15815

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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296,495 - 15814 mRNA_7446 0.69 -0.8
296,887 + 1.6
297,014 + 0.1
297,019 + -1.2
297,039 - -2.0
297,163 - -0.6
297,320 - -0.1
297,338 + 0.2
297,342 + 0.8
297,349 + -0.7
297,356 + 0.1
297,357 + -1.6
297,473 + 0.3
297,491 + 0.5
297,510 + 1.5
297,765 + 15815 mRNA_7447 0.19 1.3
298,095 - 15815 mRNA_7447 0.37 -0.7
298,217 - 15815 mRNA_7447 0.43 0.4
298,522 - 15815 mRNA_7447 0.59 -0.5
299,078 + 15815 mRNA_7447 0.88 0.4
299,099 + 15815 mRNA_7447 0.89 -0.4
299,230 + 0.5
299,375 - 4.5
299,410 - 0.4
299,416 + 0.9
299,421 - 0.3
299,421 - -0.3
299,545 - 1.0
299,575 + -0.3
299,621 + 0.5
299,724 + 2.3
299,847 - -0.0
299,848 - -1.2
299,855 + 0.3
299,872 + -1.3
299,917 + -0.4
300,260 - 1.5