Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7428

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7428: 15796 - Interpro XLF-Cernunnos, XRcc4-like factor, NHEJ component, at 251137 to 252658 15796 mRNA_7429: 15797 - KOG0254 Predicted transporter (major facilitator superfamily), at 252711 to 255477 15797

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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250,193 + 0.0
250,239 - -0.0
250,361 + 0.8
250,414 + -1.2
250,504 - -0.4
250,528 - -0.8
250,587 + -0.4
250,694 + -2.5
250,710 + -1.0
250,745 - 1.1
250,782 + 0.0
250,806 - -1.3
250,838 + 0.4
250,838 - 0.3
250,854 + 0.1
250,957 - -0.3
250,958 - 1.1
250,963 + 0.4
250,964 + 0.4
250,973 + -1.2
250,983 + 0.2
251,103 + -1.0
251,291 - 15796 mRNA_7428 0.10 0.4
252,155 - 15796 mRNA_7428 0.67 -1.8
252,169 + 15796 mRNA_7428 0.68 -2.4
252,622 + -0.3
252,895 + 1.6
253,018 - 15797 mRNA_7429 0.11 0.0
253,050 - 15797 mRNA_7429 0.12 0.4
253,513 - 15797 mRNA_7429 0.29 -1.9