Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7418

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7417: 15785 - K03353 APC6, CDC16 anaphase-promoting complex subunit 6, at 230745 to 233451 15785 mRNA_7418: 15786 - Hypothetical Protein, at 234371 to 235150 15786 mRNA_7419: 15787 - Hypothetical Protein, at 236093 to 236724 15787

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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233,445 + 0.1
233,723 + 0.1
233,741 - -1.0
233,817 - 1.1
233,817 + 0.9
233,828 - 1.2
233,855 + 0.7
234,012 + 0.7
234,158 + 1.1
234,254 - -0.8
234,280 + 0.2
234,283 + -1.3
234,300 - -0.9
234,305 + -0.6
234,321 + 0.2
234,326 + 0.8
234,342 - -0.4
234,344 + -0.5
234,369 + 0.8
234,456 - 15786 mRNA_7418 0.11 -0.9
234,460 + 15786 mRNA_7418 0.11 0.7
234,465 - 15786 mRNA_7418 0.12 -1.4
234,473 + 15786 mRNA_7418 0.13 0.2
234,477 + 15786 mRNA_7418 0.14 1.4
234,492 + 15786 mRNA_7418 0.16 0.3
234,504 + 15786 mRNA_7418 0.17 -2.0
234,507 + 15786 mRNA_7418 0.17 1.0
234,548 - 15786 mRNA_7418 0.23 -0.5
234,550 + 15786 mRNA_7418 0.23 0.4
234,551 + 15786 mRNA_7418 0.23 0.4
234,579 - 15786 mRNA_7418 0.27 0.8
234,613 - 15786 mRNA_7418 0.31 1.4
234,620 + 15786 mRNA_7418 0.32 0.6
234,631 + 15786 mRNA_7418 0.33 -1.0
234,633 - 15786 mRNA_7418 0.34 0.1
234,634 + 15786 mRNA_7418 0.34 -0.5
234,639 + 15786 mRNA_7418 0.34 0.5
234,639 + 15786 mRNA_7418 0.34 0.4
234,663 - 15786 mRNA_7418 0.37 -0.9
234,699 + 15786 mRNA_7418 0.42 1.7
234,788 - 15786 mRNA_7418 0.53 -0.8
234,798 - 15786 mRNA_7418 0.55 0.4
234,798 + 15786 mRNA_7418 0.55 1.7
234,799 + 15786 mRNA_7418 0.55 -0.8
234,806 - 15786 mRNA_7418 0.56 -0.0
234,811 + 15786 mRNA_7418 0.56 -0.9
234,811 + 15786 mRNA_7418 0.56 -1.2
234,814 - 15786 mRNA_7418 0.57 -0.6
234,814 + 15786 mRNA_7418 0.57 0.6
234,821 + 15786 mRNA_7418 0.58 0.2
234,845 - 15786 mRNA_7418 0.61 0.2
234,935 - 15786 mRNA_7418 0.72 0.0
234,965 + 15786 mRNA_7418 0.76 -0.0
235,109 - 1.9
235,115 - -1.1
235,121 + -0.3
235,271 - 0.3
235,280 + -0.2
235,545 - 0.8
235,701 + 0.4
235,824 - 0.2
235,989 + -0.0