Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7408

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7407: 15775 - Hypothetical Protein, at 202077 to 204575 15775 mRNA_7408: 15776 - K18422 MOV10 helicase MOV-10, at 204696 to 207946 15776 mRNA_7409: 15777 - HMMPfam-Nucleoporin subcomplex protein binding to Pom34-PF10487, at 208136 to 214432 15777

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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203,819 - 15775 mRNA_7407 0.70 -0.3
203,873 + 15775 mRNA_7407 0.72 0.6
204,327 - -0.1
204,397 - -0.4
204,599 + 0.6
205,274 + 15776 mRNA_7408 0.18 0.5
205,440 - 15776 mRNA_7408 0.23 0.1
205,741 + 15776 mRNA_7408 0.32 -1.2
206,449 + 15776 mRNA_7408 0.54 0.2
206,740 + 15776 mRNA_7408 0.63 0.2
206,845 - 15776 mRNA_7408 0.66 0.3
206,962 - 15776 mRNA_7408 0.70 -0.3
207,115 - 15776 mRNA_7408 0.74 -1.1
207,124 + 15776 mRNA_7408 0.75 -0.1
207,259 - 15776 mRNA_7408 0.79 0.1
207,303 + 15776 mRNA_7408 0.80 -0.0
207,407 - 15776 mRNA_7408 0.83 1.1
207,540 - 15776 mRNA_7408 0.87 -0.7
207,590 + 15776 mRNA_7408 0.89 -0.1
207,638 - -0.0
207,703 - -1.1
207,867 - 0.6
207,869 + 2.3
208,014 - -0.8