Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7391

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7390: 15758 - HMMPfam-Ubiquinol-cytochrome C reductase hinge protein-PF02320,SUPERFAMILY--SSF81531, at 168829 to 169694 15758 mRNA_7391: 15759 - K00547 mmuM, BHMT2 homocysteine S-methyltransferase, at 169814 to 171234 15759 mRNA_7392: 15760 - Hypothetical Protein, at 171609 to 172297 15760

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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169,024 + 15758 mRNA_7390 0.23 -3.4
169,295 + 15758 mRNA_7390 0.54 -2.4
169,458 + 15758 mRNA_7390 0.73 -0.3
169,466 - 15758 mRNA_7390 0.74 -0.6
169,561 - 15758 mRNA_7390 0.85 -2.8
169,568 - 15758 mRNA_7390 0.85 -1.4
169,583 + 15758 mRNA_7390 0.87 -1.7
169,614 + -3.1
169,618 + -1.2
169,629 - -3.3
169,709 + 0.3
169,723 - -0.8
169,730 - -0.6
169,741 - -0.8
169,752 + -1.8
169,764 + -0.3
169,766 - 0.3
169,913 - 0.6
170,183 - 15759 mRNA_7391 0.26 -0.8
170,497 + 15759 mRNA_7391 0.48 0.6
170,704 + 15759 mRNA_7391 0.63 -0.4
171,362 - 0.2
171,486 - 0.6
172,071 + 15760 mRNA_7392 0.67 0.6