Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7382

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7381: 15749 - K03128 TAF2 transcription initiation factor TFIID subunit 2, at 141230 to 147514 15749 mRNA_7382: 15750 - Hypothetical Protein, at 147562 to 148955 15750 mRNA_7383: 15751 - K19355 MAN mannan endo-1,4-beta-mannosidase, at 149650 to 152306 15751

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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147,116 + -1.2
147,306 + 0.1
147,309 - 1.0
147,315 + -0.3
147,895 - 15750 mRNA_7382 0.24 0.2
148,023 + 15750 mRNA_7382 0.33 -0.6
148,063 + 15750 mRNA_7382 0.36 0.6
148,169 + 15750 mRNA_7382 0.44 -0.7
148,326 + 15750 mRNA_7382 0.55 1.2
148,341 + 15750 mRNA_7382 0.56 0.1
148,396 + 15750 mRNA_7382 0.60 0.1
148,441 + 15750 mRNA_7382 0.63 0.9
148,483 - 15750 mRNA_7382 0.66 -0.6
148,587 - 15750 mRNA_7382 0.74 -0.1
148,635 - 15750 mRNA_7382 0.77 0.1
148,636 - 15750 mRNA_7382 0.77 -0.4
148,784 + 15750 mRNA_7382 0.88 -0.7
148,784 + 15750 mRNA_7382 0.88 0.3
148,808 - 15750 mRNA_7382 0.89 1.2
148,897 - -0.2
148,908 + 1.5
148,909 + 0.1
148,912 - 0.1
148,918 + -0.9
148,919 - 0.2
148,940 + 0.4
148,974 - 1.1
149,004 + 0.6
149,012 - 2.0
149,023 + 1.1
149,031 + -0.5
149,205 + -0.0
149,241 - -0.6
149,248 - -0.7
149,275 + -0.7
149,353 + -0.5
149,359 + 0.0
149,377 + -0.2
149,389 + -0.5
149,546 + 0.2
149,649 - 1.3
149,652 - 0.1
149,652 - 0.2
149,653 + 1.8
149,655 + 1.4