Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7328

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7327: 15695 - KOG2883 NIPSNAP1 protein, at 15080 to 16504 15695 mRNA_7328: 15696 - KOG1339 Aspartyl protease, at 16802 to 18584 15696

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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16,260 - 15695 mRNA_7327 0.83 0.2
16,270 - 15695 mRNA_7327 0.84 -0.8
16,314 + 15695 mRNA_7327 0.87 -2.2
16,588 + -0.6
16,598 + -0.1
16,769 - -0.3
16,797 + 0.6
17,098 - 15696 mRNA_7328 0.17 0.3
17,165 + 15696 mRNA_7328 0.20 0.8
17,318 + 15696 mRNA_7328 0.29 -0.6
17,592 + 15696 mRNA_7328 0.44 0.2
17,597 - 15696 mRNA_7328 0.45 -1.0
17,708 + 15696 mRNA_7328 0.51 -0.8
17,731 - 15696 mRNA_7328 0.52 0.5
17,895 - 15696 mRNA_7328 0.61 1.0
18,001 + 15696 mRNA_7328 0.67 -1.6
18,174 - 15696 mRNA_7328 0.77 0.3
18,187 + 15696 mRNA_7328 0.78 -0.3
18,193 + 15696 mRNA_7328 0.78 -1.3
18,195 + 15696 mRNA_7328 0.78 -0.3
18,290 - 15696 mRNA_7328 0.83 0.4
18,345 + 15696 mRNA_7328 0.87 1.2
18,433 - -0.3
18,488 + 0.4
18,600 - 4.0
18,618 - -1.9
18,813 + -1.4
19,048 - 1.1
19,062 - -1.7
19,122 + -3.1
19,182 - 1.4
19,219 - -1.0
19,227 + 0.3
19,227 + -0.1
19,228 - -0.5
19,336 - -0.0
19,338 - 1.0
19,343 + -1.5
19,356 - -1.0
19,369 - -0.3
19,503 + -1.1