Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7246

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7245: 15613 - K17972 NAA20, NAT3 N-terminal acetyltransferase B complex catalytic subunit, at 1211695 to 1212788 15613 mRNA_7246: 15614 - Hypothetical Protein, at 1212861 to 1214455 15614 mRNA_7247: 15615 - Hypothetical Protein, at 1214602 to 1216220 15615

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,212,729 + -1.4
1,212,752 - -0.6
1,213,135 - 15614 mRNA_7246 0.17 0.7
1,213,309 - 15614 mRNA_7246 0.28 0.1
1,213,661 - 15614 mRNA_7246 0.50 -0.8
1,213,768 - 15614 mRNA_7246 0.57 1.0
1,213,770 + 15614 mRNA_7246 0.57 -0.0
1,213,878 - 15614 mRNA_7246 0.64 -0.3
1,213,900 + 15614 mRNA_7246 0.65 -0.2
1,213,963 + 15614 mRNA_7246 0.69 2.1
1,214,160 - 15614 mRNA_7246 0.81 0.2
1,214,208 - 15614 mRNA_7246 0.84 -2.4
1,214,208 - 15614 mRNA_7246 0.84 -1.5
1,214,328 - -0.1
1,214,334 + -1.7
1,214,376 + 1.9
1,214,504 + 0.2
1,214,596 - -0.2
1,214,899 - 15615 mRNA_7247 0.18 0.6
1,215,069 + 15615 mRNA_7247 0.29 0.9
1,215,190 - 15615 mRNA_7247 0.36 -0.9