Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7207

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7206: 15574 - BLAST checkpoint 9-1-1 complex, HUS1 component [Moesziomyce..., at 1121305 to 1122113 15574 mRNA_7207: 15575 - KOG1209 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases, at 1122389 to 1123916 15575 mRNA_7208: 15576 - K03361 CDC4 F-box and WD-40 domain protein CDC4, at 1123960 to 1127394 15576

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,121,405 + 15574 mRNA_7206 0.12 0.0
1,121,412 - 15574 mRNA_7206 0.13 0.1
1,121,543 + 15574 mRNA_7206 0.29 -0.9
1,121,813 - 15574 mRNA_7206 0.63 0.1
1,122,331 + -0.6
1,122,397 + -2.1
1,122,404 + 0.8
1,122,813 - 15575 mRNA_7207 0.28 0.3
1,122,830 - 15575 mRNA_7207 0.29 -0.1
1,122,867 - 15575 mRNA_7207 0.31 0.6
1,123,269 - 15575 mRNA_7207 0.58 0.9
1,123,270 + 15575 mRNA_7207 0.58 -0.4
1,123,276 - 15575 mRNA_7207 0.58 -0.8
1,123,405 + 15575 mRNA_7207 0.66 0.2
1,123,576 + 15575 mRNA_7207 0.78 0.8
1,123,722 + 15575 mRNA_7207 0.87 -0.1
1,123,724 - 15575 mRNA_7207 0.87 -0.4
1,123,736 + 15575 mRNA_7207 0.88 -0.4
1,124,076 + 1.3