Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7164

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7163: 15531 - Hypothetical Protein, at 1027440 to 1028287 15531 mRNA_7164: 15532 - K13117 DHX35 ATP-dependent RNA helicase DDX35, at 1028429 to 1031367 15532 mRNA_7165: 15533 - K01867 WARS, trpS tryptophanyl-tRNA synthetase, at 1031482 to 1033004 15533

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,027,620 - 15531 mRNA_7163 0.21 -1.0
1,027,631 + 15531 mRNA_7163 0.23 0.0
1,027,774 + 15531 mRNA_7163 0.39 0.4
1,028,081 + 15531 mRNA_7163 0.76 0.4
1,028,202 - 15531 mRNA_7163 0.90 0.5
1,028,203 - -1.1
1,028,204 + 0.6
1,028,208 - -0.3
1,028,214 + -1.5
1,028,214 + -1.7
1,028,216 + 1.0
1,028,224 - -0.4
1,028,239 + -0.7
1,028,380 + -0.1
1,028,390 + -1.0
1,028,409 - 0.5
1,028,416 + 0.4
1,028,472 - -0.3
1,028,485 + -0.7
1,028,513 + 0.1
1,028,528 + -0.5
1,028,528 - 1.8
1,028,672 - 0.4
1,028,688 + 1.2
1,028,924 + 15532 mRNA_7164 0.17 -0.9
1,029,009 + 15532 mRNA_7164 0.20 0.8
1,029,195 - 15532 mRNA_7164 0.26 -0.0
1,029,405 + 15532 mRNA_7164 0.33 -0.8
1,029,865 + 15532 mRNA_7164 0.49 -0.7
1,030,007 + 15532 mRNA_7164 0.54 0.0
1,030,124 - 15532 mRNA_7164 0.58 0.6
1,030,556 + 15532 mRNA_7164 0.72 -0.8
1,030,690 + 15532 mRNA_7164 0.77 -1.1
1,030,871 - 15532 mRNA_7164 0.83 0.3
1,031,019 - 15532 mRNA_7164 0.88 0.1
1,031,046 - 15532 mRNA_7164 0.89 1.2
1,031,165 - -0.2
1,031,303 - -2.2
1,031,309 + -1.0
1,031,454 + 1.1
1,031,454 + -0.0