Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7149

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7148: 15516 - KOG2246 Galactosyltransferases, at 995963 to 997965 15516 mRNA_7149: 15517 - K12733 PPIL1 peptidyl-prolyl cis-trans isomerase-like 1, at 998100 to 998920 15517 mRNA_7150: 15518 - K01874 MARS, metG methionyl-tRNA synthetase, at 999141 to 1001312 15518

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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997,920 + -2.0
998,061 + -0.6
998,061 + -1.7
998,062 - -1.0
998,242 + 15517 mRNA_7149 0.17 -0.5
998,309 - 15517 mRNA_7149 0.25 -1.4
998,664 + 15517 mRNA_7149 0.69 0.1
998,681 + 15517 mRNA_7149 0.71 0.3
998,770 + 15517 mRNA_7149 0.82 1.2
998,795 + 15517 mRNA_7149 0.85 0.1
998,801 - 15517 mRNA_7149 0.85 0.1
998,812 - 15517 mRNA_7149 0.87 0.2
998,941 + 0.5
998,956 + -1.7
999,083 - -0.4
999,087 - 0.6
999,129 - -2.5