Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7126

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7126: 15494 - K15122 SLC41A solute carrier family 41, at 939569 to 941230 15494 mRNA_7127: 15495 - BLAST adenylate cyclase-associated protein [Moesziomyces an..., at 941404 to 943862 15495

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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938,691 - 2.7
938,837 - 2.6
938,848 - 1.7
938,849 + 2.9
938,850 + 0.6
938,960 - 2.1
938,977 - 0.5
938,978 + -0.8
938,986 + -0.5
938,989 + -0.5
938,997 + 2.2
939,000 - 1.2
939,003 + -0.3
939,007 + -0.9
939,008 + 0.2
939,008 + 1.2
939,008 - 1.0
939,009 + 0.5
939,011 + 1.6
939,019 + 1.0
939,297 + 1.2
939,441 + -1.2
939,579 + 0.9
939,866 - 15494 mRNA_7126 0.18 0.1
939,868 - 15494 mRNA_7126 0.18 1.7
940,041 - 15494 mRNA_7126 0.28 0.2
940,741 - 15494 mRNA_7126 0.71 0.5
940,877 - 15494 mRNA_7126 0.79 0.8
940,891 - 15494 mRNA_7126 0.80 -0.8
941,014 - 15494 mRNA_7126 0.87 1.8
941,309 - 0.9
941,327 + -0.7
941,328 + 1.0
941,332 - -0.7
941,460 + 0.1
941,460 + -2.1
941,590 + -0.5
941,595 - -1.4
941,602 - -0.6
941,603 + -0.8
941,612 + 0.0
941,729 - 15495 mRNA_7127 0.13 -1.3
941,736 + 15495 mRNA_7127 0.14 -0.2
941,766 - 15495 mRNA_7127 0.15 -1.0
941,772 + 15495 mRNA_7127 0.15 -1.7
941,775 + 15495 mRNA_7127 0.15 2.1
942,035 + 15495 mRNA_7127 0.26 0.7
942,049 - 15495 mRNA_7127 0.26 0.4
942,105 - 15495 mRNA_7127 0.29 2.3
942,179 - 15495 mRNA_7127 0.32 -0.7
942,187 - 15495 mRNA_7127 0.32 -0.0