Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7115

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7114: 15482 - K00383 GSR, gor glutathione reductase (NADPH), at 913071 to 914998 15482 mRNA_7115: 15483 - K00297 metF, MTHFR methylenetetrahydrofolate reductase (NADPH), at 915636 to 918075 15483 mRNA_7116: 15484 - K04393 CDC42 cell division control protein 42, at 918589 to 919535 15484

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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915,355 + 0.2
915,364 - -0.0
915,367 - 0.7
915,367 + 0.2
915,371 + -0.2
915,371 + -1.1
915,372 - -0.6
915,382 + -0.9
915,387 + 1.4
915,404 + 0.5
915,492 - -0.1
915,647 + -0.2
915,672 - -1.7
915,794 - -4.3
916,001 + 15483 mRNA_7115 0.15 -1.9
916,242 - 15483 mRNA_7115 0.25 -6.0
916,350 - 15483 mRNA_7115 0.29 -1.4
916,442 + 15483 mRNA_7115 0.33 -2.8
916,682 - 15483 mRNA_7115 0.43 -3.3
917,000 + 15483 mRNA_7115 0.56 -3.8
917,602 + 15483 mRNA_7115 0.81 -2.2
917,728 + 15483 mRNA_7115 0.86 -3.8
917,863 - -2.1
917,880 + -3.2
917,999 - -2.5
918,120 - 0.0
918,144 + 0.0
918,147 - -2.3
918,153 - 0.3
918,153 + 0.4
918,153 + 0.8
918,166 - 0.9
918,186 - 0.0
918,192 + -0.8
918,305 - -0.3
918,445 + -0.1
918,736 + 15484 mRNA_7116 0.16 -2.7
918,863 - 15484 mRNA_7116 0.29 -3.5