Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7061

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7060: 15428 - HMMPfam-Proteolipid membrane potential modulator-PF01679, at 786976 to 788620 15428 mRNA_7061: 15429 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 789472 to 792234 15429 mRNA_7062: 15430 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 792528 to 793710 15430

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
788,490 - -0.7
788,516 + 1.1
788,636 - -0.4
788,664 + -1.5
788,815 - -0.3
788,816 - 0.6
788,935 + 0.9
789,086 - 1.3
789,087 - 0.2
789,108 + -1.1
789,811 + 15429 mRNA_7061 0.12 1.5
789,874 - 15429 mRNA_7061 0.15 0.0
790,137 + 15429 mRNA_7061 0.24 -1.0
790,215 - 15429 mRNA_7061 0.27 -0.8
790,403 - 15429 mRNA_7061 0.34 2.3
790,986 - 15429 mRNA_7061 0.55 1.1
791,453 - 15429 mRNA_7061 0.72 1.6
791,699 - 15429 mRNA_7061 0.81 -1.2
791,728 - 15429 mRNA_7061 0.82 2.0
791,906 - 15429 mRNA_7061 0.88 0.8
792,025 + 0.5
792,155 - 1.5
792,179 + 0.4
792,331 + -0.2
792,333 - -1.2
792,340 - -1.3
792,344 - -0.3
792,349 + -0.2
792,507 + -0.8
792,630 - -0.3
792,634 + 0.1
792,941 - 15430 mRNA_7062 0.35 0.7
792,957 + 15430 mRNA_7062 0.36 2.0
793,128 + 15430 mRNA_7062 0.51 -1.4
793,221 - 15430 mRNA_7062 0.59 -1.0