Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7055

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7054: 15422 - K14018 PLAA, DOA1, UFD3 phospholipase A-2-activating protein, at 770607 to 773938 15422 mRNA_7055: 15423 - K03841 FBP, fbp fructose-1,6-bisphosphatase I, at 774217 to 775850 15423 mRNA_7056: 15424 - K01557 FAHD1 acylpyruvate hydrolase, at 776372 to 777538 15424

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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773,982 + 0.2
774,003 + 0.9
774,025 + 0.1
774,152 + 1.3
774,467 - 15423 mRNA_7055 0.15 -0.5
774,871 - 15423 mRNA_7055 0.40 -1.8
774,987 - 15423 mRNA_7055 0.47 -3.5
775,204 + 15423 mRNA_7055 0.60 0.3
775,288 - 15423 mRNA_7055 0.66 -1.6
775,416 - 15423 mRNA_7055 0.73 -2.2
775,446 + 15423 mRNA_7055 0.75 -3.8
775,575 - 15423 mRNA_7055 0.83 -5.5
775,636 + 15423 mRNA_7055 0.87 0.0
775,704 + -3.2
775,708 - -2.7
775,726 + -4.9
775,734 - -5.0
775,738 - -3.1
775,739 + -2.1
775,739 - -1.7
775,740 + -3.0
775,746 + -3.3
775,749 + -3.8
775,846 - -4.1
775,861 + -4.8
775,903 - -2.2
776,013 - -0.2
776,026 - 2.8
776,028 - -0.3
776,032 + -0.2
776,034 - -0.2
776,043 - 0.5
776,043 + 0.2
776,047 - -0.9
776,050 - -0.3
776,051 - -2.0
776,053 - -0.5
776,057 + -2.4
776,058 + -0.9
776,062 - -1.7
776,064 - -0.0
776,077 + 0.8
776,124 - -0.4
776,125 - 2.0
776,132 - -0.4
776,132 - 0.1
776,147 + -0.8
776,149 - 0.3
776,168 + 0.4
776,179 - -0.3
776,208 + -0.7
776,298 - 0.1
776,305 + -1.5
776,307 + -0.7
776,324 - -1.1
776,442 + -1.0
776,445 - 0.2
776,763 + 15424 mRNA_7056 0.34 0.4