Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7039

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7038: 15406 - K15458 SAP185_190 SIT4-associating protein SAP185/190, at 725352 to 729605 15406 mRNA_7039: 15407 - Hypothetical Protein, at 729956 to 731972 15407

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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729,371 + -0.6
729,491 + 1.0
729,500 - 2.1
729,643 - 0.3
729,702 - 1.8
729,777 + -0.8
729,784 + 1.8
729,803 + 0.5
729,803 + 0.5
729,806 + 1.7
729,809 + -0.1
729,813 + -1.2
729,815 + 0.6
729,947 + -0.7
729,976 - 1.1
730,208 - 15407 mRNA_7039 0.12 -0.4
730,510 + 15407 mRNA_7039 0.27 1.5
730,797 - 15407 mRNA_7039 0.42 -0.2
730,813 - 15407 mRNA_7039 0.42 0.3
731,111 - 15407 mRNA_7039 0.57 0.6
731,267 - 15407 mRNA_7039 0.65 -0.9
731,392 - 15407 mRNA_7039 0.71 -0.1
731,700 - 15407 mRNA_7039 0.86 0.6
731,709 + 15407 mRNA_7039 0.87 0.6
731,990 + 1.3
732,136 - 0.8
732,140 - -1.3
732,262 + -0.5
732,570 + 0.2
732,697 - -0.0
732,703 + 0.4
732,714 - -0.8
732,716 - 0.9
732,723 - -0.3
732,725 + 0.2
732,808 + 0.1