Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7020

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7019: 15387 - K13212 LUC7L2 RNA-binding protein Luc7-like 2, at 686088 to 688034 15387 mRNA_7020: 15388 - K11446 KDM5, JARID1 histone demethylase JARID1, at 688229 to 691595 15388

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
687,471 - 15387 mRNA_7019 0.71 1.2
687,486 - 15387 mRNA_7019 0.72 1.3
688,080 + 1.3
688,203 - 1.7
688,220 + -1.3
688,493 - -1.2
688,667 + 15388 mRNA_7020 0.13 0.5
688,806 - 15388 mRNA_7020 0.17 0.9
689,199 + 15388 mRNA_7020 0.29 0.6
689,848 + 15388 mRNA_7020 0.48 -0.2
689,959 - 15388 mRNA_7020 0.51 1.8
690,013 + 15388 mRNA_7020 0.53 -0.6
690,159 + 15388 mRNA_7020 0.57 -0.3
690,861 - 15388 mRNA_7020 0.78 0.8
691,170 + 15388 mRNA_7020 0.87 2.0
691,170 - 15388 mRNA_7020 0.87 -0.0
691,299 - -2.1
691,451 - -0.7
691,456 + 0.2
691,478 + 0.2
691,479 + -0.0
691,495 + 0.7
691,602 + 0.1
691,630 + -0.7
691,630 + 0.6
691,633 - 0.1
691,633 - -0.9
691,763 - -2.1
691,767 - -1.2
691,780 - -0.5
691,780 + -0.3
691,792 + 0.9
691,794 + 0.2
691,796 - -1.8
691,796 - -1.3
691,939 + -1.9
691,940 - -0.9
692,072 - 0.2
692,081 + -1.4
692,084 - -1.4
692,232 - 2.2
692,248 + -0.3
692,393 - -0.4
692,395 + -0.5
692,395 + 0.4
692,527 + 0.3
692,528 + 0.4
692,553 - -0.5