Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6972

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6971: 15339 - K03671 trxA thioredoxin 1, at 567242 to 568041 15339 mRNA_6972: 15340 - K20279 SYNJ synaptojanin, at 568176 to 572419 15340 mRNA_6973: 15341 - K11303 HAT1, KAT1 histone acetyltransferase 1, at 572592 to 574305 15341

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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567,224 - -0.5
567,226 - -0.1
567,236 - 1.5
567,236 - -0.2
567,385 + 15339 mRNA_6971 0.18 1.1
567,501 - 15339 mRNA_6971 0.32 1.1
567,949 + 15339 mRNA_6971 0.88 -0.2
567,952 + 15339 mRNA_6971 0.89 0.5
568,079 - 0.3
568,090 + -0.8
568,104 + 2.1
568,106 - 0.1
568,222 - -2.4
568,232 - -0.9
568,242 + -1.0
568,381 + -0.3
568,533 + -2.6
568,996 + 15340 mRNA_6972 0.19 -0.2
569,274 - 15340 mRNA_6972 0.26 1.5
569,592 + 15340 mRNA_6972 0.33 -0.5
569,881 - 15340 mRNA_6972 0.40 1.6
570,001 - 15340 mRNA_6972 0.43 1.2
570,850 + 15340 mRNA_6972 0.63 -0.6
570,880 - 15340 mRNA_6972 0.64 -0.6
571,171 - 15340 mRNA_6972 0.71 -1.0
571,192 + 15340 mRNA_6972 0.71 -0.9
571,461 + 15340 mRNA_6972 0.77 0.4
571,502 - 15340 mRNA_6972 0.78 -1.7
571,753 - 15340 mRNA_6972 0.84 -0.9
571,950 - 15340 mRNA_6972 0.89 2.1
572,365 - 0.3
572,516 - 1.8
572,645 - 1.3
572,672 + 0.5
572,678 + -0.2
572,791 + 15341 mRNA_6973 0.12 1.5