Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6945

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6944: 15312 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 495585 to 496942 15312 mRNA_6945: 15313 - SUPERFAMILY--SSF52047, at 497234 to 499004 15313 mRNA_6946: 15314 - K04713 SUR2 sphinganine C4-monooxygenase, at 499195 to 500447 15314

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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496,680 - 15312 mRNA_6944 0.81 0.3
496,864 - 0.2
496,886 - -0.1
496,974 - -0.3
496,989 - -1.0
497,002 - -1.0
497,148 + -0.0
497,294 - 0.7
497,438 + 15313 mRNA_6945 0.12 2.5
497,449 - 15313 mRNA_6945 0.12 0.0
497,459 + 15313 mRNA_6945 0.13 -2.5
497,594 - 15313 mRNA_6945 0.20 -0.1
497,597 + 15313 mRNA_6945 0.20 -0.1
497,997 + 15313 mRNA_6945 0.43 3.2
498,333 - 15313 mRNA_6945 0.62 -1.1
498,486 + 15313 mRNA_6945 0.71 0.7
498,574 - 15313 mRNA_6945 0.76 -0.5
498,931 + -0.4
498,941 - 0.5
498,942 - 0.3
498,947 + 1.4
499,066 - 0.6
499,073 + -0.2