Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6923

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6922: 15290 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 436165 to 438557 15290 mRNA_6923: 15291 - Hypothetical Protein, at 439430 to 443984 15291 mRNA_6924: 15292 - BLAST PC-Esterase [Xanthophyllomyces dendrorhous], at 444538 to 446309 15292

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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438,627 - -0.2
438,782 - -1.1
438,813 + -0.1
439,209 + -0.6
439,432 - -1.3
439,748 + 0.3
439,878 - 0.2
439,947 + 15291 mRNA_6923 0.11 0.1
439,947 + 15291 mRNA_6923 0.11 -3.1
440,131 + 15291 mRNA_6923 0.15 -0.0
440,771 + 15291 mRNA_6923 0.29 0.0
440,962 + 15291 mRNA_6923 0.34 -0.8
441,408 - 15291 mRNA_6923 0.43 -2.3
441,422 + 15291 mRNA_6923 0.44 -0.3
441,493 + 15291 mRNA_6923 0.45 -1.6
442,042 - 15291 mRNA_6923 0.57 -0.5
442,193 - 15291 mRNA_6923 0.61 1.1
442,288 - 15291 mRNA_6923 0.63 0.0
442,557 + 15291 mRNA_6923 0.69 -1.6
442,587 - 15291 mRNA_6923 0.69 0.0
443,054 - 15291 mRNA_6923 0.80 -1.7
443,603 - 0.4
443,634 - -1.0
443,757 + 0.5
443,907 - -0.2
443,920 - -2.0
444,077 - 0.1
444,081 - 0.0
444,230 + 1.3
444,243 + -2.1
444,393 - -0.3
444,395 - -0.6
444,400 - 0.3
444,400 - -1.4
444,405 - -0.9
444,418 + 1.5
444,448 + 0.1
444,504 - 1.2
444,505 + -0.3
444,541 + 1.2
444,796 + 15292 mRNA_6924 0.15 -0.7
444,797 + 15292 mRNA_6924 0.15 -0.5