Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6917

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6916: 15284 - SUPERFAMILY--SSF52833, at 426501 to 427574 15284 mRNA_6917: 15285 - K04883 KCNAB2 potassium voltage-gated channel Shaker-related subfamily A, beta member 2, at 427811 to 428744 15285

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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426,841 - 15284 mRNA_6916 0.32 -0.4
427,018 + 15284 mRNA_6916 0.48 0.6
427,277 - 15284 mRNA_6916 0.72 0.3
427,324 - 15284 mRNA_6916 0.77 0.6
427,542 - 0.9
427,738 - 0.6
428,363 - 15285 mRNA_6917 0.59 1.2
428,622 + 15285 mRNA_6917 0.87 -0.6
428,635 - 15285 mRNA_6917 0.88 0.2
428,647 + 15285 mRNA_6917 0.90 1.1
428,940 - -0.4
429,204 - -0.3
429,239 + -1.0
429,314 - -2.0
429,332 + -1.1
429,369 - 1.4
429,394 + -0.7
429,425 + 1.5
429,500 - 1.3
429,509 + -0.3
429,512 - 0.7
429,516 - -0.2
429,522 - 1.6
429,522 - 0.6
429,527 + -0.3
429,550 + -0.4
429,557 + 1.5
429,564 + 1.8
429,596 + -0.3
429,597 - -0.8
429,600 + -2.2
429,609 + -1.7
429,612 - 0.7
429,621 - 0.9
429,626 - -0.4
429,634 + 0.1
429,651 - 0.6
429,661 - 0.4