Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6915

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6914: 15282 - KOG0254 Predicted transporter (major facilitator superfamily), at 421351 to 423576 15282 mRNA_6915: 15283 - K01130 E3.1.6.1, aslA arylsulfatase, at 424136 to 426200 15283 mRNA_6916: 15284 - SUPERFAMILY--SSF52833, at 426501 to 427574 15284

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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423,149 - 15282 mRNA_6914 0.81 -0.3
423,282 + 15282 mRNA_6914 0.87 -0.9
423,434 - -0.0
423,466 + -0.9
423,708 + 2.2
423,715 + -1.7
423,731 - 0.9
423,734 - 0.6
423,894 - 0.1
423,918 - 0.5
423,936 - -0.6
423,949 + 0.3
423,953 + 0.8
423,954 + -2.1
423,955 + 1.0
423,965 - 0.2
423,966 + -1.3
423,977 - -0.8
423,980 + 2.0
423,991 + -0.8
424,001 + -0.8
424,005 + -0.8
424,017 + -0.1
424,045 + 1.9
424,136 + -0.5
424,145 - 0.9
424,242 + 0.5
424,344 - 15283 mRNA_6915 0.10 -1.0
424,349 + 15283 mRNA_6915 0.10 -2.4
424,746 + 15283 mRNA_6915 0.30 -0.7
424,746 + 15283 mRNA_6915 0.30 0.7
425,115 - 15283 mRNA_6915 0.47 -0.5
425,435 - 15283 mRNA_6915 0.63 -1.4
425,750 - 15283 mRNA_6915 0.78 0.3
425,803 + 15283 mRNA_6915 0.81 -1.7
426,132 - -1.9
426,379 - -0.6
426,424 - 0.4
426,602 + 1.5
426,764 - 15284 mRNA_6916 0.24 0.6
426,841 - 15284 mRNA_6916 0.32 -0.4
427,018 + 15284 mRNA_6916 0.48 0.6